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Virtual server for applications (from scratch)
Install base system
Install QIIME (1.5.0)
Fix Qiime installation test errors (1.5.0)
Install Trinity
Install Blast+ and Blast legacy
Install bioperl
Install QIIME (1.6.0)
Install Mira from source (3.9.9)
Update Mira from source (3.9.10/3.9.11/3.9.18)
Mira 3rd party tools
SMALT and SSAHA2
Tophat (1.4.1 from binary)
R, RStudio server and Bioconductor
Install QIIME (1.7.0)
Install Pandaseq
WGS-assembler
AMOS
MUMmer
BWA
BLASR
HMMER
Upgrade Trinity + RSEM
Trinotate
rachaelx/start.txt
ยท Last modified: 2013/11/20 16:41 by
giancarlo
Developers:
CNR IRCrES IT Office and Library
Giancarlo Birello (giancarlo.birello _@_ ircres.cnr.it) and Anna Perin (anna.perin _@_ ircres.cnr.it)
ASA@TO.CNR
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